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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs70994761 chr2:132189481 A/AT CCDC74B chr2:130896860-130902707:- 0.37 6.63 9.27E-11 Box Plot
THCA rs70994773 chr2:132212288 GC/G CCDC74B chr2:130896860-130902707:- 0.37 6.71 5.39E-11 Box Plot
THCA rs70997427 chr5:43666822 TG/T UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs70997429 chr5:43682129 A/AT UQCRC1 chr3:48636435-48648409:- -0.34 -6.06 2.76E-9 Box Plot
THCA rs7103112 chr11:49593303 G/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.3 6.81E-10 Box Plot
THCA rs7103527 chr11:49096793 C/T FOLH1B chr11:89372395-89431886:+ 0.45 6.69 6.23E-11 Box Plot
THCA rs7103693 chr11:78857659 C/T ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs7103912 chr11:78857781 C/T ICAM3 chr19:10444452-10450499:- -0.42 -6.56 1.41E-10 Box Plot
THCA rs7106301 chr11:49195756 T/A FOLH1B chr11:89372395-89431886:+ -0.37 -6.5 2.06E-10 Box Plot
THCA rs7106401 chr11:48523759 A/G FOLH1B chr11:89372395-89431886:+ 0.42 6.18 1.39E-9 Box Plot
THCA rs7108164 chr11:48626363 A/C FOLH1B chr11:89372395-89431886:+ 0.43 6.29 7.26E-10 Box Plot
THCA rs7109526 chr11:49569604 C/T FOLH1B chr11:89372395-89431886:+ -0.35 -6.41 3.48E-10 Box Plot
THCA rs7111215 chr11:49430552 T/C FOLH1B chr11:89372395-89431886:+ -0.34 -6.1 2.26E-9 Box Plot
THCA rs7112076 chr11:48512465 C/T FOLH1B chr11:89372395-89431886:+ 0.42 6.12 1.95E-9 Box Plot
THCA rs71130846 chr14:39852111 CTT/C LOC647288 chr13:75811890-75814517:- -0.52 -9.65 2.96E-20 Box Plot